STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK2Ankyrin 2b, neuronal. (2009 aa)    
Predicted Functional Partners:
LOC101065280
Uncharacterized protein.
    
 0.822
sptbn4
Spectrin beta chain; Belongs to the spectrin family.
   
 0.686
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
 0.686
sptbn1
Spectrin beta chain; Belongs to the spectrin family.
   
 0.686
LOC101069768
Spectrin beta chain; Belongs to the spectrin family.
   
 0.686
RNF146
Ring finger protein 146.
    
 0.650
Rnf146
Ring finger protein 146.
    
 0.650
sptan1
Uncharacterized protein.
   
 0.610
AXIN2
Axin 2.
    
 0.586
axin1
Axin 1.
    
 0.586
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.