STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd2bp2CD2 (cytoplasmic tail) binding protein 2. (376 aa)    
Predicted Functional Partners:
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.977
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.960
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.
   
 
 0.944
prpf8
Pre-mRNA processing factor 8.
    
 
 0.933
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 
 0.918
SART1
Squamous cell carcinoma antigen recognised by cytotoxic T lymphocytes.
   
 
 0.899
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.892
aar2
AAR2 splicing factor.
   
 
 0.835
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 
 0.832
ENSTRUP00000067866
Helicase for meiosis 1.
   
 
 0.827
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.