Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ptrh2Peptidyl-tRNA hydrolase 2. (187 aa)    
Predicted Functional Partners:
LOC101063412
Cytochrome C oxidase assembly factor 5.
   
 
 0.720
LOC101068591
Cytochrome c oxidase assembly homolog 15 (yeast).
     
 0.709
HP1BP3
Heterochromatin protein 1 binding protein 3.
      
 0.709
lrrc7
Leucine rich repeat containing 7.
      
 0.699
erbin
Erbb2 interacting protein.
      
 0.699
setd5
SET domain containing 5.
      
 0.684
LOC101061764
Cytochrome C oxidase assembly factor 3a.
   
 0.659
bptf
Bromodomain PHD finger transcription factor.
      
 0.654
LOC101078073
Bromodomain PHD finger transcription factor.
      
 0.654
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.639
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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