Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fmnl2Formin-like 2a. (1094 aa)    
Predicted Functional Partners:
LOC101073733
Uncharacterized protein.
   
 0.615
LOC101067723
Cell division cycle 42.
   
 0.615
flcn
Folliculin.
    
 
 0.553
LOC101068145
Uncharacterized protein.
   
 0.530
daam1
Dishevelled associated activator of morphogenesis 1b.
   
 0.529
stoml1
Stomatin (EPB72)-like 1.
    
 0.493
LOC101076147
Uncharacterized protein.
    
 0.491
LOC101070117
Ras homolog gene family, member Aa.
    
 0.491
LOC101064166
Uncharacterized protein.
    
 0.491
LOC101071942
Uncharacterized protein.
    
 0.491
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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