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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066348Oxysterol-binding protein; Belongs to the OSBP family. (866 aa)    
Predicted Functional Partners:
LOC101076333
G protein-coupled receptor 89B.
 
      0.813
KATNAL2
Katanin catalytic subunit A1 like 2; Belongs to the AAA ATPase family.
   
 
 0.547
ENSTRUP00000070399
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 
 0.547
slc22a18
Solute carrier family 22 member 18.
   
  
 0.534
LOC101066578
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
 
    
 0.528
gm2a
ML domain-containing protein.
      
 0.497
utp20
UTP20 small subunit processome component.
   
  
 0.490
arl15
ADP-ribosylation factor-like 15a.
   
 0.454
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
      
 0.437
phlda2
Pleckstrin homology-like domain, family A, member 2.
      
 0.433
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.