Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101066348Oxysterol-binding protein; Belongs to the OSBP family. (866 aa)    
Predicted Functional Partners:
LOC101076333
G protein-coupled receptor 89B.
 
      0.813
LOC101066578
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.718
LOC101063965
Golgi glycoprotein 1b.
    
   0.642
LOC101075456
Golgi glycoprotein 1a.
    
   0.642
slc22a18
Solute carrier family 22 member 18.
   
  
 0.636
gm2a
ML domain-containing protein.
      
 0.636
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
      
 0.633
utp20
UTP20 small subunit processome component.
   
  
 0.618
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.544
LOC101070052
Thrombospondin 4b.
    
 0.514
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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