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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063903Protein disulfide-isomerase. (645 aa)    
Predicted Functional Partners:
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.980
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.980
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.921
mttp
Microsomal triglyceride transfer protein.
   
 0.839
LOC101074526
Calreticulin.
   
 0.804
calr
Calreticulin.
   
 0.804
LOC101078631
Protein phosphatase 1, regulatory subunit 27b.
    
 0.773
p4ha2
Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.
   
 0.749
p4ha1
Prolyl 4-hydroxylase, alpha polypeptide I b.
   
 0.749
LOC101071700
Fe2OG dioxygenase domain-containing protein.
   
 0.749
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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