STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079054Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.852
H2SKM1_TAKRU
Epsin 3b.
    
 
 0.686
LOC101075741
Epsin 1.
    
 
 0.686
LOC101074699
Epsin 3a.
    
 
 0.686
LOC105417169
Cell surface glycoprotein 1-like isoform X1.
    
 
 0.686
ENSTRUP00000082466
Epsin-2-like.
    
 
 0.686
ENSTRUP00000085072
annotation not available
    
 
 0.686
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.666
LOC101077097
NBR1 autophagy cargo receptor b.
   
 
 0.650
ENSTRUP00000049325
GSAP-16 domain-containing protein.
   
 
 0.650
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.