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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl14Kelch-like family member 14. (605 aa)    
Predicted Functional Partners:
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.710
KLHL28
Kelch like family member 28.
  
 
 
0.565
bbs9
Bardet-Biedl syndrome 9.
    
 0.528
ttc8
Tetratricopeptide repeat domain 8.
    
 0.497
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.485
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.482
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.475
LOC115248454
RING-box protein 1.
    
 0.463
LOC101079814
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.463
ENSTRUP00000017266
N-acetylneuraminic acid phosphatase.
   
 
 0.458
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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