Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtmr7Myotubularin related protein 7a. (652 aa)    
Predicted Functional Partners:
pikfyve
PIPK domain-containing protein.
     
 0.928
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
   
 
 0.924
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.924
bag3
Inositol polyphosphate-5-phosphatase F.
     
 0.914
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.905
LOC101062629
Si:dkey-266f7.9.
     
  0.900
LOC115246434
Zgc:154055.
   
 0.848
mtmr9
Myotubularin related protein 9.
   
 0.848
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.745
plcd3
Phosphoinositide phospholipase C.
     
 0.720
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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