Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101064707Heat shock protein, alpha-crystallin-related, b11; Belongs to the small heat shock protein (HSP20) family. (212 aa)    
Predicted Functional Partners:
LOC101062073
Uncharacterized protein; Belongs to the parvalbumin family.
    
 
 0.443
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.442
mapkapk5
MAPK activated protein kinase 5.
    
 0.442
mapkapk2
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.442
LOC101066672
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.442
bag5
BCL2 associated athanogene 5.
   
 
 0.414
rps27a
Ribosomal protein S27a.
   
  0.407
ENSTRUP00000072583
Myosin light polypeptide 6-like.
   
 
 0.401
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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