STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073804Bromodomain and PHD finger containing, 3b. (1245 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.873
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.727
LOC101073735
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.715
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.715
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.715
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.715
ing5
Inhibitor of growth family, member 5a.
    
 0.701
ing4
Inhibitor of growth protein.
    
 0.665
ENSTRUP00000086668
Inhibitor of growth family, member 4.
    
 0.665
LOC101076032
Sterile alpha motif domain containing 1a.
   
 0.647
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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