STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc5Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (805 aa)    
Predicted Functional Partners:
golga7
Golgin A7.
   
 0.858
LOC101076213
Golgin A7 family, member Ba.
   
 0.848
abca7
Zgc:172302.
     
  0.532
abca1
ATP-binding cassette, sub-family A (ABC1), member 1A.
     
  0.532
cldnd1
Claudin domain containing 1a.
    
   0.524
LOC101061386
Uncharacterized protein.
    
   0.524
pot1
Protection of telomeres 1 homolog.
    
 0.470
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
     
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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