STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRPPRCLeucine-rich pentatricopeptide repeat containing. (1430 aa)    
Predicted Functional Partners:
slirp
SRA stem-loop interacting RNA binding protein.
   
 0.994
ptcd3
Pentatricopeptide repeat domain 3.
   
 
 0.880
vdac1
Voltage-dependent anion channel 1.
   
 
 0.862
ndufa10
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.827
ENSTRUP00000076039
Translational activator of cytochrome c oxidase 1-like.
    
 
 0.817
TACO1
Translational activator of mitochondrially encoded cytochrome c oxidase I.
    
 
 0.817
mrpl58
Mitochondrial ribosomal protein L58.
    
 
 0.808
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.789
mrpl45
Mitochondrial ribosomal protein L45.
    
 
 0.787
LOC101067196
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.775
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.