STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspg2Heparan sulfate proteoglycan 2. (3494 aa)    
Predicted Functional Partners:
LOC101078584
Dystroglycan 1.
   
 0.979
LOC101073584
Peptidase S72 domain-containing protein.
   
 0.979
nid1
Nidogen 1a.
   
 0.834
ENSTRUP00000051666
Nidogen 2a (osteonidogen).
   
 0.834
ccn2
Cellular communication network factor 2a.
    
 
 0.715
LOC101063377
Decorin; May affect the rate of fibrils formation.
   
 
 0.703
fgf7
Fibroblast growth factor 7; Belongs to the heparin-binding growth factors family.
    
 0.688
agrn
Agrin.
     
0.687
apoe2
Apolipoprotein E2.
   
 0.678
apoe1
Uncharacterized protein.
   
 0.596
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.