Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
otosOtospiralin. (85 aa)    
Predicted Functional Partners:
LOC101069283
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.695
samd7
Sterile alpha motif domain containing 7.
   
  
 0.680
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.679
gpr160
Uncharacterized protein.
      
 0.660
skil
SKI-like proto-oncogene a.
   
  
 0.642
LOC101073636
NAD kinase b.
      
 0.619
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
      
 0.592
LOC101077037
Tyrosine kinase, non-receptor, 2a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.584
LOC101073072
Teleost multiple tissue opsin b; Belongs to the G-protein coupled receptor 1 family.
      
 0.572
tecta
Tectorin alpha.
      
 0.520
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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