STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mlf2Myeloid leukemia factor 2. (248 aa)    
Predicted Functional Partners:
stub1
STIP1 homology and U-Box containing protein 1.
   
   0.880
edf1
Endothelial differentiation-related factor 1.
   
  
 0.769
emc7
ER membrane protein complex subunit 7.
   
  
 0.728
DNAJB2
DnaJ heat shock protein family (Hsp40) member B2.
   
 
 0.722
c12h1orf43
Chromosome 1 open reading frame 43.
   
  
 0.720
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
      
 0.699
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.676
LOC101076635
RNA binding motif protein 10.
   
  
 0.666
LOC101069420
Uncharacterized protein.
   
 
 0.662
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7.
   
 
 0.662
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.