Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC105418143Plasmalemma vesicle associated protein a. (582 aa)    
Predicted Functional Partners:
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
    
 
 0.890
LOC101061224
Anoctamin.
    
 0.877
ano8
Anoctamin.
    
 0.769
nr2f1
Nuclear receptor subfamily 2, group F, member 1a.
    
 0.746
nr2f6
Nuclear receptor subfamily 2, group F, member 6b.
    
 0.716
LOC101075267
Nuclear receptor subfamily 2, group F, member 6a.
    
 0.716
ENSTRUP00000034070
annotation not available
      
 0.608
LOC105417520
Hairy/enhancer-of-split related with YRPW motif protein 2-like.
    
 0.525
FABP7
Fatty acid binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.430
LOC101079341
FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.430
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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