Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
INSYN2AInhibitory synaptic factor 2A. (489 aa)    
Predicted Functional Partners:
mtrf1l
Mitochondrial translational release factor 1-like.
      
 0.677
rpl6
Ribosomal protein L6.
    
   0.605
igfals
Insulin-like growth factor binding protein, acid labile subunit.
    
 0.598
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.578
LOC101063638
DEAH (Asp-Glu-Ala-His) box polypeptide 32b.
      
 0.547
SLC2A9
Solute carrier family 2 member 9; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.545
ebf3
EBF transcription factor 3a.
      
 0.541
WDR1
WD repeat domain 1.
      
 0.541
pcsk1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
  
 
 0.511
mtrf1
Mitochondrial translational release factor 1.
      
 0.475
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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