Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl4Mitochondrial ribosomal protein L4. (302 aa)    
Predicted Functional Partners:
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.994
mrpl15
Mitochondrial ribosomal protein L15.
  
 0.990
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
  
 0.990
mrpl1
Mitochondrial ribosomal protein L1.
  
 0.989
mrpl17
Mitochondrial ribosomal protein L17.
  
 
 0.989
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.989
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.989
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.988
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.987
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.986
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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