close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cercamCerebral endothelial cell adhesion molecule. (591 aa)    
Predicted Functional Partners:
plod1
Fe2OG dioxygenase domain-containing protein.
   
0.961
plod2
Fe2OG dioxygenase domain-containing protein.
   
0.961
LOC101072864
Collagen beta(1-O)galactosyltransferase 1.
  
  
 
0.902
colgalt2
Collagen beta(1-O)galactosyltransferase 2.
  
  
 
0.902
ogfod2
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
   
 0.518
LOC101062524
Uncharacterized protein.
   
 0.471
LOC101079628
Collagen, type VI, alpha 2.
   
 0.471
ENSTRUP00000051171
Uncharacterized protein.
    
 0.441
col17a1
Collagen alpha-1(XVII) chain isoform X1.
    
 0.441
ttyh1
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.432
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.