Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101067735acidPPc domain-containing protein. (267 aa)    
Predicted Functional Partners:
gpr182
G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.629
eef1aknmt
Methyltransferase like 13.
      
 0.516
edrf1
Erythroid differentiation regulatory factor 1.
      
 0.512
LOC101067064
SUN domain-containing protein.
      
 0.506
suco
Uncharacterized protein.
      
 0.506
LOC101079400
Adrenoceptor alpha 2B; Belongs to the G-protein coupled receptor 1 family.
      
 0.436
tm9sf4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.434
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.424
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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