Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
H2T9T0_TAKRUUncharacterized protein. (162 aa)    
Predicted Functional Partners:
ENSTRUP00000083220
Collagen alpha-1(IX) chain-like.
 
    
0.855
LOC101069747
Endostatin domain-containing protein.
  
 
 
0.652
ENSTRUP00000072890
Collagen alpha-5(IV) chain-like.
  
  
 
0.597
COL26A1
Collagen type XXVI alpha 1 chain.
  
  
 0.575
H2S9Q7_TAKRU
C1q domain-containing protein.
  
  
  0.570
ENSTRUP00000081645
annotation not available
  
 
  0.558
MARCO
Uncharacterized protein.
  
 
  0.550
COLEC10
Collectin subfamily member 10.
  
 
  0.539
ENSTRUP00000084089
Collagen alpha-4(IV) chain-like isoform X1.
  
     0.536
ENSTRUP00000061468
annotation not available
  
     0.535
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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