STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NinNinein (GSK3B interacting protein). (1424 aa)    
Predicted Functional Partners:
LOC101077614
TPR_REGION domain-containing protein.
   
 0.609
plk3
Serine/threonine-protein kinase PLK.
   
 0.598
LOC101066651
CAP-Gly domain-containing protein.
    
 
 0.572
ENSTRUP00000085655
Dynactin subunit 1-like isoform X1.
    
 
 0.572
lca5
Lebercilin LCA5.
      
 0.566
nek7
NIMA-related kinase 7.
    
 0.548
plk4
Polo-like kinase 4 (Drosophila).
   
 0.544
zfand4
Zinc finger, AN1-type domain 4.
    
 0.542
ENSTRUP00000028069
Diphthamide biosynthesis protein 3.
    
 
 0.541
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 
 0.520
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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