Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2T9X0_TAKRUCalcium binding protein 5a. (171 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
 
 0.751
VSX2
Visual system homeobox 2.
      
 0.586
myo1b
Myosin IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.551
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.547
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.540
guca1b
Guanylate cyclase activating protein 2.
   
 0.530
wdr90
WD repeat domain 90.
   
 0.524
alpk1
Alpha kinase 1.
      
 0.517
ENSTRUP00000038486
annotation not available
    
 
 0.498
ENSTRUP00000058125
Adenylate/nucleoside-diphosphate kinase.
    
 
 0.498
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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