Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101080189Uncharacterized protein. (501 aa)    
Predicted Functional Partners:
ENSTRUP00000061623
annotation not available
  
0.574
LOC101069124
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.565
LOC101072612
Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
  
   
 0.530
LOC101069556
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
 0.526
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.525
bard1
BRCA1 associated RING domain 1.
    
 0.511
ENSTRUP00000053212
Exonuclease 1.
    
 0.485
rad50
RAD50 homolog, double strand break repair protein.
    
 0.477
LOC101067951
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.457
LOC101075886
Cytochrome P450, family 3, subfamily c, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.455
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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