Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
styxSerine/threonine/tyrosine interacting protein. (299 aa)    
Predicted Functional Partners:
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
      
 0.852
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
 
 0.756
txndc16
Thioredoxin domain containing 16.
     
 0.724
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
    
 
 0.717
fbxo38
F-box protein 38.
    
   0.668
gpr137c
G protein-coupled receptor 137c.
      
 0.647
ddhd1
DDHD domain containing 1a.
      
 0.617
fbxl12
F-box domain-containing protein.
    
   0.602
rtraf
RNA transcription, translation and transport factor.
      
 0.600
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
     
 0.567
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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