rnps1 protein (Takifugu rubripes) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

rnps1

RNA binding protein S1, serine-rich domain. (282 aa)

Predicted Functional Partners:

sap18

0.995

eif4a3

0.978

UPF2

0.966

rbm8a

0.963

LOC101074005

0.918

LOC101061384

0.918

pnn

0.912

LOC101064659

0.909

UPF1

0.903

LOC101074911

0.901

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101061384	LOC101074005	ENSTRUP00000085237	ENSTRUP00000058203	SAP domain-containing protein.	Apoptotic chromatin condensation inducer 1b.	0.900
LOC101061384	LOC101074911	ENSTRUP00000085237	ENSTRUP00000075905	SAP domain-containing protein.	RNA-binding protein with serine-rich domain 1-B-like isoform X1.	0.918
LOC101061384	eif4a3	ENSTRUP00000085237	ENSTRUP00000029160	SAP domain-containing protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.861
LOC101061384	pnn	ENSTRUP00000085237	ENSTRUP00000082108	SAP domain-containing protein.	Pinin, desmosome associated protein.	0.902
LOC101061384	rbm8a	ENSTRUP00000085237	ENSTRUP00000033509	SAP domain-containing protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.758
LOC101061384	rnps1	ENSTRUP00000085237	ENSTRUP00000021579	SAP domain-containing protein.	RNA binding protein S1, serine-rich domain.	0.918
LOC101061384	sap18	ENSTRUP00000085237	ENSTRUP00000020653	SAP domain-containing protein.	Sin3A-associated protein.	0.995
LOC101064659	LOC101074911	ENSTRUP00000000308	ENSTRUP00000075905	Uncharacterized protein.	RNA-binding protein with serine-rich domain 1-B-like isoform X1.	0.879
LOC101064659	UPF1	ENSTRUP00000000308	ENSTRUP00000012294	Uncharacterized protein.	Putative regulator of nonsense transcripts 1; RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an rent1-rent2-rent3 surveillance complex is believed to activate NMD (By similarity).	0.900
LOC101064659	UPF2	ENSTRUP00000000308	ENSTRUP00000018623	Uncharacterized protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.998
LOC101064659	eif4a3	ENSTRUP00000000308	ENSTRUP00000029160	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.829
LOC101064659	rbm8a	ENSTRUP00000000308	ENSTRUP00000033509	Uncharacterized protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.946
LOC101064659	rnps1	ENSTRUP00000000308	ENSTRUP00000021579	Uncharacterized protein.	RNA binding protein S1, serine-rich domain.	0.909
LOC101074005	LOC101061384	ENSTRUP00000058203	ENSTRUP00000085237	Apoptotic chromatin condensation inducer 1b.	SAP domain-containing protein.	0.900
LOC101074005	LOC101074911	ENSTRUP00000058203	ENSTRUP00000075905	Apoptotic chromatin condensation inducer 1b.	RNA-binding protein with serine-rich domain 1-B-like isoform X1.	0.918
LOC101074005	eif4a3	ENSTRUP00000058203	ENSTRUP00000029160	Apoptotic chromatin condensation inducer 1b.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.861
LOC101074005	pnn	ENSTRUP00000058203	ENSTRUP00000082108	Apoptotic chromatin condensation inducer 1b.	Pinin, desmosome associated protein.	0.902
LOC101074005	rbm8a	ENSTRUP00000058203	ENSTRUP00000033509	Apoptotic chromatin condensation inducer 1b.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.758
LOC101074005	rnps1	ENSTRUP00000058203	ENSTRUP00000021579	Apoptotic chromatin condensation inducer 1b.	RNA binding protein S1, serine-rich domain.	0.918
LOC101074005	sap18	ENSTRUP00000058203	ENSTRUP00000020653	Apoptotic chromatin condensation inducer 1b.	Sin3A-associated protein.	0.995