Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rspry1Ring finger and SPRY domain containing 1. (592 aa)    
Predicted Functional Partners:
efcab1
Uncharacterized protein.
      
 0.832
gpatch3
G patch domain containing 3.
      
 0.826
arl2bp
ADP-ribosylation factor-like 2 binding protein.
 
    
 0.823
slc10a7
Sodium/bile acid cotransporter; Does not show transport activity towards bile acids or steroid sulfates; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
      
 0.805
eaf1
ELL associated factor 1.
      
 0.802
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
      
 0.780
LOC101065111
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
 
 0.772
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.748
LOC101076991
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.748
ist1
IST1 factor associated with ESCRT-III.
      
 0.724
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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