Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064347Synaptogyrin. (239 aa)    
Predicted Functional Partners:
mak
Male germ cell-associated kinase.
   
    0.478
ICK
Intestinal cell kinase.
   
    0.478
MOK
MOK protein kinase.
   
    0.478
gfod2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.476
LOC101079431
Zgc:86896.
   
    0.470
arpc1a
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
    0.470
LOC101077791
Uncharacterized protein.
      
 0.445
itsn1
Intersectin 1 (SH3 domain protein).
      
 0.443
zcchc4
Zinc finger, CCHC domain containing 4.
   
    0.430
ENSTRUP00000010653
Vesicle transport through interaction with t-SNAREs 1B.
   
  
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (42%) [HD]