Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cep89Centrosomal protein of 89 kDa isoform X1. (773 aa)    
Predicted Functional Partners:
ENSTRUP00000049371
Uncharacterized protein.
    
 
 0.903
fbf1
Uncharacterized protein.
     
 0.863
H2THN7_TAKRU
Uncharacterized protein.
     
 0.859
ENSTRUP00000063916
Centrosomal protein of 83 kDa-like isoform X1.
     
 0.859
LOC101063900
Sodium channel and clathrin linker 1.
     
 0.832
ncs1
Neuronal calcium sensor 1a.
    
 0.824
cep164
Uncharacterized protein.
     
 0.816
cep76
Centrosomal protein 76.
     
 0.755
poc5
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.714
ift88
Intraflagellar transport 88 homolog.
      
 0.710
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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