STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep89Centrosomal protein of 89 kDa isoform X1. (773 aa)    
Predicted Functional Partners:
LOC101063900
Sodium channel and clathrin linker 1.
     
 0.662
atrip
Uncharacterized protein.
   
    0.650
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
   
    0.648
CEP128
Centrosomal protein 128.
      
 0.618
cep76
Centrosomal protein 76.
     
 0.600
fbf1
Uncharacterized protein.
      
 0.585
Cep350
Centrosomal protein 350.
      
 0.582
cep164
Uncharacterized protein.
     
 0.574
c2cd3
C2 domain containing 3 centriole elongation regulator.
      
 0.564
septin2
Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
     
 0.558
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.