Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb48Zinc finger and BTB domain containing 48. (770 aa)    
Predicted Functional Partners:
dclre1b
DNA cross-link repair 1B.
    
 
 0.711
SRBD1
S1 RNA binding domain 1.
    
 
 0.708
naif1
Nuclear apoptosis inducing factor 1.
      
 0.704
LOC101067942
Ribosomal protein L26.
    
 
 0.657
rpl36a
60S ribosomal protein L36a.
    
   0.628
rpl3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.621
RPL3L
Ribosomal protein L3 like.
    
   0.621
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.573
hmbox1
Homeobox containing 1.
    
 
 0.551
LOC101068461
Chromobox protein homolog 8-like.
    
 0.537
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.