Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rin2Si:ch211-85n16.4. (877 aa)    
Predicted Functional Partners:
ENSTRUP00000053212
Exonuclease 1.
    
   0.902
crnkl1
Crooked neck pre-mRNA splicing factor 1.
      
 0.827
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
      
 0.733
mcph1
Microcephalin 1.
     
 0.722
LOC101066249
Centromere protein J.
    
 
 0.718
med12
Mediator complex subunit 12.
      
 0.695
RAB17
RAB17, member RAS oncogene family.
    
 0.657
rab5c
RAB5C, member RAS oncogene family.
    
 0.657
LOC101069188
Uncharacterized protein.
    
 0.657
LOC101071138
RAB5A, member RAS oncogene family, a.
    
 0.657
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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