Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101062635Zgc:171929. (272 aa)    
Predicted Functional Partners:
ENSTRUP00000071887
Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family.
      
 0.684
nsun2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.587
ubr3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.486
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
      
 0.476
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.475
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.475
LOC101063389
Uncharacterized protein.
      
 0.444
banf1
Barrier to autointegration factor 1.
      
 0.444
LOC101078914
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.439
LOC101068502
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.439
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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