Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM216Transmembrane protein 216. (143 aa)    
Predicted Functional Partners:
tmem67
Transmembrane protein 67.
   
 
 0.985
tctn3
DUF1619 domain-containing protein.
     
 0.966
mks1
MKS transition zone complex subunit 1.
     
 0.963
ENSTRUP00000057217
C2 domain-containing protein.
     
 0.960
rpgrip1l
RPGRIP1 like.
      
 0.861
LOC105417852
Uncharacterized protein.
     
 0.847
B9d2
B9 domain containing 2.
     
 0.847
ahi1
Abelson helper integration site 1.
     
 0.847
ENSTRUP00000078928
annotation not available
     
 0.847
nphp1
Nephrocystin-1.
      
 0.831
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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