STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIAPH1Diaphanous related formin 1. (1038 aa)    
Predicted Functional Partners:
LOC101073733
Uncharacterized protein.
   
 0.706
LOC101067723
Cell division cycle 42.
   
 0.706
LOC101075302
Ras homolog family member F.
   
 0.700
LOC101076147
Uncharacterized protein.
   
 0.655
LOC101070117
Ras homolog gene family, member Aa.
   
 0.655
LOC101064166
Uncharacterized protein.
   
 0.655
LOC101071942
Uncharacterized protein.
   
 0.655
LOC101077509
Ras homolog family member Ca.
   
 0.655
rnd3
Rho family GTPase 3a.
   
 0.650
LOC101064615
Rho family GTPase 1b.
   
 0.650
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.