STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hexdHexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing. (477 aa)    
Predicted Functional Partners:
xylb
Xylulokinase homolog (H. influenzae).
      
 0.704
hddc3
HD domain containing 3.
   
    0.692
hexb
Beta-hexosaminidase.
      
 0.629
gask1a
Golgi associated kinase 1A.
      
 0.565
ino80e
INO80 complex subunit E.
    
 0.539
LOC101069099
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
   
 0.526
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.526
LOC101077498
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.526
LOC101069051
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.526
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.526
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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