STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101070835Solute carrier family 38 member 3b. (507 aa)    
Predicted Functional Partners:
LOC101061287
Ras-related GTP binding A.
   
 0.666
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.639
anapc15
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.609
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.604
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.586
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.572
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
     
 0.443
rb1cc1
RB1-inducible coiled-coil 1.
   
 
  0.439
LOC101076816
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.438
ATP6V1B2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.424
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]