STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt7Beta1,4-galactosyltransferase 7. (322 aa)    
Predicted Functional Partners:
B3galt6
Galactosylxylosylprotein 3-beta-galactosyltransferase.
    
 0.965
LOC101067678
Xylosyltransferase II.
     
 0.954
LOC101066747
Uncharacterized protein.
     
 0.937
LOC101067123
Xylosyltransferase I.
     
 0.937
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
 
      0.729
tmed9
Transmembrane p24 trafficking protein 9.
 
 
  
 0.646
uxs1
UDP-glucuronate decarboxylase 1.
   
  
 0.614
LOC101063580
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.610
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
  
 0.578
slc35b2
Solute carrier family 35 member B2.
   
  
 0.574
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.