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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3tc2SH3 domain and tetratricopeptide repeats 2. (1510 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.842
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
0.604
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.566
gdap1
Ganglioside induced differentiation associated protein 1.
      
 0.556
LOC101079078
Zinc finger and BTB domain containing 3.
      
 0.556
itgb4
Integrin beta.
      
 0.552
sbf2
SET binding factor 2.
      
 0.513
sbf1
Uncharacterized protein.
      
 0.513
LOC101069789
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
      
 0.457
mtmr2
Myotubularin related protein 2.
      
 0.433
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.