Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101071119Blood vessel epicardial substance. (360 aa)    
Predicted Functional Partners:
kcnk2
Potassium channel, subfamily K, member 2b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.935
LOC101075749
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.935
LOC101070890
Popeye domain containing 3.
  
 
0.919
popdc2
Popeye domain containing 2.
  
 
0.915
LOC101073904
Tight junction protein 1b; Belongs to the MAGUK family.
     
 0.914
LOC101069449
Tight junction protein 1a; Belongs to the MAGUK family.
     
 0.914
cav3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
  
 0.468
trappc11
Trafficking protein particle complex 11.
      
 0.444
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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