STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC446087Cholinergic receptor, nicotinic, alpha 1 (muscle). (477 aa)    
Predicted Functional Partners:
LOC446090
Cholinergic receptor, nicotinic, alpha 4b.
  
0.646
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.643
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
0.613
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
0.611
LOC446028
Uncharacterized protein.
  
0.611
LOC446029
Cholinergic receptor, nicotinic, alpha 10a.
  
0.607
LOC446016
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.592
LOC446015
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.592
ENSTRUP00000013993
annotation not available
  
0.591
CHRNA5
Cholinergic receptor, nicotinic, alpha 5.
  
0.591
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.