Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101070647Glutaminyl-peptide cyclotransferase. (374 aa)    
Predicted Functional Partners:
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.695
tmed6
Transmembrane p24 trafficking protein 6.
      
 0.654
LOC101064787-2
ShKT domain-containing protein; Belongs to the CRISP family.
   
 
 0.631
LOC101069181
ShKT domain-containing protein.
   
 
 0.631
nif3l1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae).
    
   0.630
ostm1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.629
NUBP1
Cytosolic Fe-S cluster assembly factor NUBP1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.
    
   0.624
rnpepl1
Arginyl aminopeptidase like 1.
     
 0.572
erp44
Endoplasmic reticulum protein 44.
   
 0.537
bckdk
Protein-serine/threonine kinase.
      
 0.517
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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