Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snip1FHA domain-containing protein. (305 aa)    
Predicted Functional Partners:
bud13
BUD13 homolog.
   
 0.992
rbmx2
RNA binding motif protein X-linked 2.
   
 0.987
snw1
SNW domain containing 1.
    
 
 0.966
sf3b1
Splicing factor 3b, subunit 1.
    
 
 0.951
mfap1
Microfibril associated protein 1.
   
 
 0.949
pnn
Pinin, desmosome associated protein.
   
 
 0.931
ncbp3
Nuclear cap binding subunit 3.
    
   0.930
ik
IK cytokine.
    
   0.919
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.885
cwc22
CWC22 spliceosome associated protein homolog.
   
 
 0.879
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.