Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hnrnprHeterogeneous nuclear ribonucleoprotein R. (618 aa)    
Predicted Functional Partners:
hnrnpc
RRM domain-containing protein.
   
 0.916
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.887
LOC101076991
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.887
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.866
srsf7
Serine and arginine rich splicing factor 7a.
   
 0.822
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.786
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.785
H2RPD9_TAKRU
RRM domain-containing protein.
   
 0.766
ENSTRUP00000075247
annotation not available
   
 0.766
hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.766
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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