P2RY4 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

P2RY4

Pyrimidinergic receptor P2Y4. (352 aa)

Predicted Functional Partners:

p2rx1

0.728

LOC101066291

0.668

LOC101063826

0.668

LOC101076768

0.661

LOC101077978

0.661

LOC101065458

0.605

LOC101070550

0.605

p2rx7

0.604

p2rx5

0.579

p2rx2

0.542

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101063826	LOC101066291	ENSTRUP00000071083	ENSTRUP00000061567	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Uncharacterized protein.	0.544
LOC101063826	LOC101076768	ENSTRUP00000071083	ENSTRUP00000000999	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Uncharacterized protein.	0.546
LOC101063826	LOC101077978	ENSTRUP00000071083	ENSTRUP00000001000	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Guanine nucleotide binding protein (G protein), alpha 14.	0.590
LOC101063826	P2RY4	ENSTRUP00000071083	ENSTRUP00000022171	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Pyrimidinergic receptor P2Y4.	0.668
LOC101065458	LOC101070550	ENSTRUP00000022146	ENSTRUP00000067205	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.586
LOC101065458	P2RY4	ENSTRUP00000022146	ENSTRUP00000022171	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	Pyrimidinergic receptor P2Y4.	0.605
LOC101065458	p2rx1	ENSTRUP00000022146	ENSTRUP00000073783	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.601
LOC101065458	p2rx2	ENSTRUP00000022146	ENSTRUP00000040498	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.650
LOC101065458	p2rx5	ENSTRUP00000022146	ENSTRUP00000002195	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.	0.569
LOC101066291	LOC101063826	ENSTRUP00000061567	ENSTRUP00000071083	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.544
LOC101066291	LOC101076768	ENSTRUP00000061567	ENSTRUP00000000999	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC101066291	LOC101077978	ENSTRUP00000061567	ENSTRUP00000001000	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 14.	0.917
LOC101066291	P2RY4	ENSTRUP00000061567	ENSTRUP00000022171	Uncharacterized protein.	Pyrimidinergic receptor P2Y4.	0.668
LOC101070550	LOC101065458	ENSTRUP00000067205	ENSTRUP00000022146	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.586
LOC101070550	P2RY4	ENSTRUP00000067205	ENSTRUP00000022171	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	Pyrimidinergic receptor P2Y4.	0.605
LOC101070550	p2rx1	ENSTRUP00000067205	ENSTRUP00000073783	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.602
LOC101070550	p2rx2	ENSTRUP00000067205	ENSTRUP00000040498	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	0.583
LOC101070550	p2rx5	ENSTRUP00000067205	ENSTRUP00000002195	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.	0.619
LOC101070550	p2rx7	ENSTRUP00000067205	ENSTRUP00000022168	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.	Purinergic receptor P2X, ligand-gated ion channel, 7.	0.488
LOC101076768	LOC101063826	ENSTRUP00000000999	ENSTRUP00000071083	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.546