Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069619DUF4201 domain-containing protein. (189 aa)    
Predicted Functional Partners:
H2RTP0_TAKRU
DUF4200 domain-containing protein.
    
 
 0.863
H2TWS9_TAKRU
Uncharacterized protein.
    
 
 0.816
ccdc96
DUF4201 domain-containing protein.
   
 
 0.807
cfap73
Uncharacterized protein.
   
 
 0.803
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
   0.802
H2SLX9_TAKRU
Enkurin domain-containing protein.
   
 
 0.801
LOC101074513
EF-hand domain (C-terminal) containing 1.
   
 
 0.801
ENSTRUP00000085869
Uncharacterized protein.
   
 
 0.797
wdr90
WD repeat domain 90.
    
 
 0.786
H2TXK8_TAKRU
NYD-SP28 domain-containing protein.
   
 
 0.781
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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