Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072417Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
LOC101070469
Doublesex and mab-3 related transcription factor 2b.
      
 0.750
Fbxl6
F-box and leucine-rich repeat protein 6.
   
  
 0.716
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.697
kank4
KN motif and ankyrin repeat domains 4.
    
 0.658
dmrta1
DM domain-containing protein.
      
 0.631
LOC101077791
Uncharacterized protein.
    
 0.587
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.524
LOC101079099
Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.
      
 0.502
LOC101078378
Plectin b.
    
 
 0.484
dmrta2
Doublesex- and mab-3-related transcription factor A2; May be involved in sexual development; Belongs to the DMRT family.
      
 0.471
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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