LOC101069844 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC101069844

Inositol polyphosphate phosphatase-like 1b. (1141 aa)

Predicted Functional Partners:

inpp5d

0.935

inppl1

0.935

inpp4a

0.926

pik3c2a

0.923

Pik3c2b

0.923

pik3c2g

0.923

LOC101072250

0.920

inpp4b

0.920

pten

0.917

grb2

0.878

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101069844	LOC101072250	ENSTRUP00000022365	ENSTRUP00000058391	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate-4-phosphatase type I Ab.	0.920
LOC101069844	Pik3c2b	ENSTRUP00000022365	ENSTRUP00000082226	Inositol polyphosphate phosphatase-like 1b.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.923
LOC101069844	grb2	ENSTRUP00000022365	ENSTRUP00000020659	Inositol polyphosphate phosphatase-like 1b.	Growth factor receptor-bound protein 2b.	0.878
LOC101069844	inpp4a	ENSTRUP00000022365	ENSTRUP00000078507	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate-4-phosphatase type I Aa.	0.926
LOC101069844	inpp4b	ENSTRUP00000022365	ENSTRUP00000072745	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate-4-phosphatase type II B.	0.920
LOC101069844	inpp5d	ENSTRUP00000022365	ENSTRUP00000003026	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate-5-phosphatase D.	0.935
LOC101069844	inppl1	ENSTRUP00000022365	ENSTRUP00000060204	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate phosphatase-like 1a.	0.935
LOC101069844	pik3c2a	ENSTRUP00000022365	ENSTRUP00000038296	Inositol polyphosphate phosphatase-like 1b.	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.	0.923
LOC101069844	pik3c2g	ENSTRUP00000022365	ENSTRUP00000087610	Inositol polyphosphate phosphatase-like 1b.	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.	0.923
LOC101069844	pten	ENSTRUP00000022365	ENSTRUP00000051139	Inositol polyphosphate phosphatase-like 1b.	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.	0.917
LOC101072250	LOC101069844	ENSTRUP00000058391	ENSTRUP00000022365	Inositol polyphosphate-4-phosphatase type I Ab.	Inositol polyphosphate phosphatase-like 1b.	0.920
LOC101072250	Pik3c2b	ENSTRUP00000058391	ENSTRUP00000082226	Inositol polyphosphate-4-phosphatase type I Ab.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.916
LOC101072250	inpp4a	ENSTRUP00000058391	ENSTRUP00000078507	Inositol polyphosphate-4-phosphatase type I Ab.	Inositol polyphosphate-4-phosphatase type I Aa.	0.901
LOC101072250	inpp4b	ENSTRUP00000058391	ENSTRUP00000072745	Inositol polyphosphate-4-phosphatase type I Ab.	Inositol polyphosphate-4-phosphatase type II B.	0.902
LOC101072250	inpp5d	ENSTRUP00000058391	ENSTRUP00000003026	Inositol polyphosphate-4-phosphatase type I Ab.	Inositol polyphosphate-5-phosphatase D.	0.910
LOC101072250	inppl1	ENSTRUP00000058391	ENSTRUP00000060204	Inositol polyphosphate-4-phosphatase type I Ab.	Inositol polyphosphate phosphatase-like 1a.	0.920
LOC101072250	pik3c2a	ENSTRUP00000058391	ENSTRUP00000038296	Inositol polyphosphate-4-phosphatase type I Ab.	Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.	0.916
LOC101072250	pik3c2g	ENSTRUP00000058391	ENSTRUP00000087610	Inositol polyphosphate-4-phosphatase type I Ab.	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.	0.916
LOC101072250	pten	ENSTRUP00000058391	ENSTRUP00000051139	Inositol polyphosphate-4-phosphatase type I Ab.	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.	0.934
Pik3c2b	LOC101069844	ENSTRUP00000082226	ENSTRUP00000022365	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Inositol polyphosphate phosphatase-like 1b.	0.923