Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptpn3Protein tyrosine phosphatase non-receptor type 3. (875 aa)    
Predicted Functional Partners:
pts
6-pyruvoyl tetrahydrobiopterin synthase.
    
 
 0.676
LOC101068715
Mitogen-activated protein kinase.
    
  0.666
LOC101062695
Mitogen-activated protein kinase 12a.
    
  0.666
LOC101067377
Mitogen-activated protein kinase.
    
  0.648
LOC101064045
Mitogen-activated protein kinase.
    
  0.648
LOC101074428
Mitogen-activated protein kinase.
    
  0.648
LOC101074026
Mitogen-activated protein kinase.
    
  0.648
eps15
Epidermal growth factor receptor pathway substrate 15.
    
  0.608
LOC101063020
Epidermal growth factor receptor pathway substrate 15 like 1.
    
  0.608
eps15l1
Epidermal growth factor receptor pathway substrate 15-like 1a.
    
  0.608
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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