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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068817ANK_REP_REGION domain-containing protein. (235 aa)    
Predicted Functional Partners:
LOC101073968
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.681
ENSTRUP00000040395
annotation not available
   
 0.681
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.681
LOC101064018
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.681
LOC101069117
Serine/threonine-protein phosphatase alpha-2 isoform-like.
   
 0.681
LOC101068875-2
Ankyrin repeat domain-containing protein 1-like.
  
 
  0.523
asb9
Uncharacterized protein.
  
 
  0.515
LOC101068875
Ankyrin repeat domain 1a (cardiac muscle).
  
 
  0.511
LOC101062948
Uncharacterized protein.
  
 
  0.510
asb5
Ankyrin repeat and SOCS box containing 5a.
  
 
  0.493
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.